Plant And Cell Physiology
◐ Oxford University Press (OUP)
Preprints posted in the last 90 days, ranked by how well they match Plant And Cell Physiology's content profile, based on 16 papers previously published here. The average preprint has a 0.01% match score for this journal, so anything above that is already an above-average fit.
Magyar, Z.; Hamid, R. S. B.; Vadai-Nagy, F.; Gombos, M.; Domonkos, I.; Perez-Perez, J. M.; Feher, A.
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The RETINOBLASTOMA-RELATED (RBR) protein in plants functions as a cell-cycle inhibitor, regulating cell numbers in developing organs and establishing cellular quiescence during growth. Although the role of RBR counterparts in animals also involves regulating cell size, this potential function remains unexplored in plants. We investigated transgenic Arabidopsis plants with altered RBR levels and observed corresponding changes in cell size from embryogenesis through organ development. In addition, stomatal meristemoid cells with reduced RBR levels divided beyond the size threshold, whereas elevated RBR levels increased their size. RBR stimulated terminal differentiation in the stomatal lineage by inducing MUTE and CYCLIN D5;1 expression, whereas reduced RBR levels maintained asymmetric divisions through high SPEECHLESS and CYCLIN D3;1 expression. Interestingly, the cell proliferation-dependent phosphorylation of RBR at the conserved 911Ser site positively correlated with RBR protein levels in the transgenic lines and aligned with the effect of RBR on cell size. This study discusses the potential link between RBRs control of cell proliferation and cell size, providing new insights into the coordinated regulation of plant development.
Giourieva, V.; Tersenidis, C.; Poulios, S.; Kouskouveli, A.; Athanasiadis, A.; Vlachonasios, K.; Panteris, E.; Komis, G.
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Sterol biosynthesis underlies significant physiological functions in plants, including the production of membrane structural sterols and hormones such as brassinosteroids and cytokinins. Inhibition of sterol biosynthesis has been shown to disrupt multiple aspects of Arabidopsis thaliana development. Here, the effects of lovastatin, an inhibitor of HMG-CoA reductase, on root development were investigated, focusing on auxin-cytokinin distribution and transport. Lovastatin inhibited primary root growth, especially cell elongation, in a dose-dependent manner. Additionally, lateral root density was considerably increased and lateral root primordia (LRP) emerged ectopically. In accordance to the above defects, auxin/cytokinin imbalance was recorded by the ectopic presence of the synthetic auxin marker DR5 and a significant decrease of cytokinins, as revealed by depletion of the TCS (two-component signaling) marker. Because auxin distribution appeared disturbed, auxin transport impairment was further examined. Plasma membrane localization of PIN auxin efflux carriers declined significantly, showing additional diffuse cytoplasmic localization in LRP cells. However, the cell-specific localization patterns of several PINs and their abundance at the transcript and protein level appeared unaffected or slightly increased. Fluorescence recovery after photobleaching (FRAP) analysis regarding membrane kinetics of PIN2 revealed altered PIN2 membrane dynamics and transmission electron microscopy (TEM) observations showed structural defects at the plasma membrane-cell wall interface. Together, these results support that sterol biosynthesis is essential for maintaining plasma membrane organization, which, in turn, is key factor for the distribution of hormones that control root development. HighlightsLovastatin treatment inhibits root growth and causes deregulated formation of lateral roots. Consistently, lovastatin causes altered patterns of auxin distribution relevant to PIN protein mis-localization and decreases cytokinin levels. These changes could be attributed to reduced structural sterols as exemplified from alteration in PIN2 membrane dynamics.
You, Y.; Balaji, A.; Herrera Valderrama, A. L.; Denarie, M.-E.; Hassan Muralidhar, S.; Ramirez Gaona, M.; Hanika, K.; Verstappen, F.; Kappers, I. F.; van Kan, J. A. L.
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Steroidal glycoalkaloids and saponins are plant cholesterol-based steroid metabolites with antimicrobial activities and potential pharmacological value. The saponin uttroside B from black nightshade (Solanum nigrum) plays an important role in defense against herbivorous insect and exhibits anti-hepatocellular carcinoma activity. The tomato (S. lycopersicum) glycoalkaloid -tomatine has been studied because of its antinutritional effects, however, its role in protecting plants from fungal pathogens remains understudied. The biosynthetic pathway of -tomatine involves multiple clustered genes designated as glycoalkaloid metabolism (GAME) genes. In this study, we generated single knockout mutants of SlGAME4 and SlGAME2 by CRISPR/Cas9-based genome editing. The SlGAME4 mutants did not accumulate glycoalkaloids but instead redirected resources towards steroidal saponin (uttroside B) synthesis. SlGAME2 mutants contained unaltered -tomatine contents indicating that the SlGAME2 gene, previously reported to catalyze the transfer of xylose to {beta}1-tomatine, is not involved in -tomatine biosynthesis. Infection assays with four fungal tomato pathogens demonstrated that the SlGAME4 mutant plants were slightly more susceptible to Botrytis cinerea, but equally susceptible to the other three fungi. Up-regulation of -tomatine-responsive genes in B. cinerea was observed during infection on SlGAME4 mutant tomato, as well as on S. nigrum suggesting that uttroside B induces a fungal transcriptional response similar to -tomatine. Furthermore, we observed that tolerance mechanisms to plant saponins mediated by glycosyl hydrolases and a glycosyltransferase contribute to virulence of B. cinerea on SlGAME4 mutant plants and S. nigrum. This indicates that also uttroside B contributes to defense against fungal pathogens and can be detoxified by B. cinerea.
Park, S.; Finlayson, S. A.; Li, C.
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Plants acclimate to mechanical stimuli such as touch and wind via thigmomorphogenesis, a suite of developmental responses that alter their growth and architecture. However, the early signaling mechanisms translating mechanoperception into long-term morphological changes remain incompletely understood. We investigated the role of the rapidly touch-induced transcription factor RRTF1 (REDOX RESPONSIVE TRANSCRIPTION FACTOR 1) in these processes. Phenotypically, under aggressive mechanical stimulation, rrtf1 mutant exhibited attenuated stunting (less height reduction). This suggests a key role for RRTF1 in promoting thigmomorphogenic responses under severe mechanical stimuli, though the rrtf1 mutant responded similarly to wild-type under gentle, repeated brushing. The alleviation of growth stunting in rrtf1 was largely jasmonic acid (JA)-independent. Transcriptome analysis at 10 minutes post-touch revealed that rrtf1 mutant maintained approximately 86% of wild-type touch-responsive gene expression. Nevertheless, RRTF1 modulated specific regulons, partly through an interplay with WRKY transcription factors, as evidenced by altered TF binding motif enrichment in RRTF1-specific differentially expressed genes. We conclude that RRTF1 acts as a modulator of early touch signaling in Arabidopsis shoots. It is not essential for the bulk of the initial transcriptional response but fine-tunes specific gene sets and plays a crucial role in calibrating long-term thigmomorphogenic development, particularly by promoting growth inhibition under severe mechanical stimulation. This study provides insights into the alleviation of touch-induced growth inhibition in rrft1 mutant, which might be relevant to breeding for crops that are planted in high density and experience constant physical contact with neighboring plants.
Cuthbert, D.; Tansley, C.; Salmon, M.; Patron, N.
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Virus induced gene silencing (VIGS) is a method that exploits plant antiviral defence mechanisms to downregulate endogenous genes. The technique is versatile, rapid, and widely used for functional genomics studies. Here we report a method for VIGS in the medicinal plant, Calendula officinalis (pot marigold). This species produces anti-inflammatory triterpenoids and has also been bred and cultivated as an ornamental plant. We describe a method for the injection of Agrobacterium tumefaciens cultures into leaf midribs and compare visual marker genes for tracking VIGS utilising constructs that simultaneously target visual marker and target genes. We use these tools to demonstrate that silencing a gene encoding cycloartenol synthase results in changes to leaf phytosterols. This method could be used to further investigate the genetic basis of specialised metabolism in this species and could be adapted to other members of the Asteraceae family, many of which are of economical and chemical value.
Bemer, M.; Chambrier, P.; Hernandez Ciro, N.; Morel, P.; Thoris, K.; An, E.; Rodrigues Bento, S.; Vandenbussche, M.
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Fruit development is a typical angiosperm feature that greatly facilitates seed dispersal. Despite extensive studies on the gene regulatory network underlying pod shattering in the dry Arabidopsis fruit and the ripening process in the fleshy tomato fruit, it is yet unclear if a conserved regulatory network acts in early fruit development. Here, we investigated the roles of Petunia x hybrida (petunia) FRUITFULL (FUL), SHATTERPROOF (SHP) and APETALA 2 (AP2) homologs, three types of transcription factors repeatedly associated with fruit development and/or ripening. Petunia is closely related to tomato but produces dry dehiscent fruits like Arabidopsis. Our functional analysis revealed that the three petunia FUL-like genes, PETUNIA FLOWERING GENE (PFG), FLORAL BINDING PROTEIN 26 (FBP26) and FBP29, redundantly regulate endocarp development. They promote the formation of regularly shaped inner endocarp cells, probably via auxin/brassinosteroid signalling and cell wall modification. Furthermore, we discovered that the SHP-like gene FLORAL BINDING PROTEIN 6 (FBP6) has an opposite role, promoting more mesocarp-shaped endocarp cells, indicating that the FUL-like and SHP-like genes act antagonistically in early pericarp development. Finally, we show that the AP2-like genes REPRESSOR OF B-FUNCTION 1 (ROB1), ROB2 and ROB3 are crucial factors in petunia fruit development. rob1 rob2 rob3 mutants completely fail to dehisce and show major defects in pericarp patterning. The ROB transcription factors repress the activity of the FUL-like genes, and have, together with FBP6, an opposite effect on auxin and brassinosteroid signalling genes. Our study suggests that a module consisting of antagonistically acting TFs, including co-orthologs of AP2, FUL and SHP, regulates early pericarp patterning, at least partially via auxin and brassinosteroids.
Willig, J.-J.; van Schaik, C.; Faesen, R.; Suresh, S.; Sterken, M. G.; Teklu, M. G.; Smant, G.
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Belowground, plants are exposed to a wide range of biotic stresses that vary in severity and nature, including tissue damage, disruption of vascular connectivity, and depletion of assimilates. How plants adapt their root systems to cope with different types of belowground biotic stresses is not well known. In this paper we compare above- and belowground plant adaptations to three nematode species with distinct tissue migration and feeding behaviours to study mechanisms underlying tolerance to different types of biotic stresses. We monitored both green canopy growth and changes in root system architecture of Arabidopsis inoculated with Pratylenchus penetrans, Heterodera schachtii, and Meloidogyne incognita. This revealed three distinct phases in aboveground plant responses: (i) initial growth inhibition associated with host invasion and tissue damage, (ii) persistent growth reduction associated with nematode sedentarism, and (iii) late growth stimulus in more advanced stages of infection. Specific adaptations in the root systems further revealed fundamentally different stress coping strategies. Tissue damage and intermittent feeding by P. penetrans in the root cortex did not induce significant changes in root system architecture. Tissue damage to the root cortex and prolonged feeding on host vascular cells by H. schachtii induced secondary root formation compensating for primary root growth inhibition. Prolonged feeding on host vascular cell by M. incognita alone did not induce secondary root formation, but was accompanied by typical local tissue swelling instead. Our data suggest that local secondary root formation and tissue swelling are two distinct compensatory mechanisms underlying tolerance to sedentarism by root-feeding nematodes. HighlightHow plants utilize root system plasticity to cope with different types of biotic stresses by root feeding nematodes remains largely unknown. Here, we report on specific adaptive growth responses in Arabidopsis roots to three nematode species, Pratylenchus penetrans, Heterodera schachtii, and Meloidogyne incognita, with fundamentally different strategies for host invasion, subsequent migration through host tissue, and feeding on host cells.
Martin-Cardoso, H.; Bundo, M.; Garcia-Molina, A.; San Segundo, B.
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Leaf senescence is a programmed plant developmental process that can also be regulated by environmental factors, like nutrient availability. Although phosphorus is an essential element determining plants growth and productivity, mechanisms underlying adaptation to phosphorus availability in plants are not well understood. In this study, we combined physiological, biochemical and molecular approaches to investigate the effect of phosphate supply on leaf senescence in rice. We show that short-term treatment of rice seedlings with low phosphate increases photosynthetic pigments content, confers tolerance to methyl viologen-induced oxidative stress in chloroplasts, and increases antioxidant enzyme activities. Leaves from low-Pi-treated plants also showed a reduction in membrane lipid peroxidation and electrolyte leakage. Opposite trends were observed in seedlings under high Pi supply, in which accelerated leaf senescence occurs. Further analyses indicated that CRISPR/Cas9-mediated editing of MIR827, and subsequent reduction in Pi content, promotes delayed leaf senescence, while Pi accumulation in MIR827 or MIR399 overexpressing plants accelerates senescence. These findings strongly support that short treatment with low phosphate delays rice leaf senescence. Transcriptomic analysis demonstrated multiple biological processes underlying adaptation of rice plants to low phosphate, including senescence-associated and metabolic processes. These findings provide novel insights into leaf senescence potentially contributing to sustainable rice production.
Wan, J.; Yang, M.; Song, J. H.; Xu, C.; Cho, S.-H.; Zhou, M.; Pasa-Tolic, L.; Yang, B.; Xu, D.; Stacey, G.
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Previously, the chitin receptor-interacting protein kinase LIK1 (LysM receptor kinase 1/CERK1-interacting kinase) was shown to play an important role in regulating chitin signaling and plant defense. A limited proteolysis proteomics study revealed several LIK1-derived peptides that showed differential abundance between ATP-treated and mock-treated Arabidopsis samples, suggesting a possible involvement of LIK1 in extracellular ATP (eATP) signaling. To explore this possibility, LIK1 mutants were obtained and examined for their response to ATP. The results showed that mutations in LIK1 significantly reduced the expression of eATP-responsive genes. In addition, LIK1 was found to interact with the eATP receptor P2K1 and to be phosphorylated by it. The LIK1 protein was localized to the plasma membrane and its gene expression appeared to be ubiquitous. Collectively, these findings indicate that LIK1 not only contributes to chitin signaling but also participates in eATP signaling, highlighting its potential role as a shared component in multiple signaling pathways to regulate plant responses to diverse internal and external cues.
Zheku, J.; Do, T.; Ashraf, A.
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Root hair cells, which are instrumental in water and nutrient uptake, grow polarly from the epidermal cell layer of the root. Furthermore, plants growing in challenging climates and complex soil environments acclimatize their root hair phenotypes, either by altering root hair length or density. Toxic metal stress is one of the major environmental stresses faced by plant roots. In this study, we demonstrate that toxic metals, such as chromium and arsenite, increase root hair density as an adaptive response. Using the model plant Arabidopsis thaliana and other crops plants, like Zea mays and Triticum aestivum, we further discovered that increased root hair density is caused by shorter epidermal cell length rather than alteration of epidermal cell fate. This study highlights the adaptive cellular and anatomical features of roots during toxic metal stress in evolutionary diverse plant species.
Matsuura-Tokita, K.; Mizuta, Y.; Kurihara, D.; Higashiyama, T.
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In angiosperms, pollen tubes deliver sperm cells to the ovule and communicate with the external environment as they elongate through the pistils. Although pollination alters Ca2+ conditions within the pistil, the effects of extracellular Ca2+ fluctuations on pollen tube growth and guidance remain largely unknown. In this study, we visualized intracellular Ca2+ dynamics using a semi-in vivo assay with the Ca2+-sensitive fluorescent protein GCaMP6s to investigate how pollen tubes respond to changes in extracellular Ca2+ levels. We found that the Ca2+ levels in the apical region of the pollen tubes reflected the extracellular Ca2+ concentrations. The pollen tube growth rate increased depending on the Ca2+ concentration in the growth medium. However, excessive Ca2+ affected the polar growth of pollen tubes. At elevated Ca2+ concentrations of 10 mM, the pollen tube exhibited coiling behavior and failed to maintain directional growth toward the ovule. Moreover, we provided the first evidence that Ca2+ oscillations are not restricted to the apical region but propagate as a wave, reaching 30-50 m from the apex toward the basal regions. As the pollen tube approached the ovule, it coincided with a substantial elevation in Ca2+ levels, which appeared to drive the accelerated nuclear migration toward the tube apex. Our findings demonstrate that the extracellular Ca2+ environment directly regulates intracellular Ca2+ levels in pollen tubes, thereby influencing their growth and guidance.
Kong, W.; Mosciatti Jofre, A.; Boulanger, J.; Marrelec, G.; Savy, T.; Couturier, E.
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Paul Green hypothesized that growth anisotropy of plant cylindrical organs could be controlled by cell-wall elastic strain. The present study aimed to challenge this hypothesis through a robust experimental and analytical framework. By combining live-cell imaging of C. corallina internodal cells with controlled turgor pressure manipulation, we simultaneously measured, for the first time, both the growth strain rate tensor and the elastic compliance tensor derived from multiaxial mechanical testing in the same cell. Under Greens hypothesis, a significant correlation should be observed between the two tensors in all directions. Our results revealed a moderate yet significant correlation between multiaxial elastic compliances and growth strain rates most pronounced in the axial direction. The ratio of axial-to-radial elastic compliance was significantly correlated with the ratio of radial-to-axial growth strain rates. In contrast, other quantities, such as the radial compliance components or the orientations of the two tensors relative to the cell axis showed no significant correlation. Furthermore the growth strain rate tensor was strongly age-dependent in both magnitude and orientation, unlike the elastic compliance. Finally, analysis of intra-tensor variability revealed that axial and radial components were strongly correlated for both tensors, with a lowered correlation in the principal axis decomposition.
Bernardini, C.; Welker, S.; Vincent, C. I.; Khalilzadeh, M.; Musetti, R.; Van Bel, A. J. E.; Levy, A.
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Very little is known about the sieve element (SE) endomembrane system. In terms of surface area, the most important membrane is the SE endoplasmic reticulum, characterized by a unique cisternal structure of anchored flat and smooth stacks. Plasma membrane contact sites (MCSs) play a crucial role in anchoring the endoplasmic reticulum (ER) to the plasma membrane (PM) and in maintaining membrane intergrity. Here, we tested their role of MCSs in the endomembrane system of the sieve elements. Synaptotagmin A (SYTA) is one of the best-studied proteins known to form ER-PM MCSs in plants. We show that SYTA:RFP co-localizes with SUC2::GFP and CALS7::GFP, confirming its presence in Arabidopsis SEs. In syta-1 mutants, SER lost its discrete shape and separated from the SE wall. The export of 14C-compounds from leaves of wild type plants was about 10% higher than in syta-1 mutants. Finally, we explored SYTAs role in phytoplasma infection response. After infection, syta-1 plants displayed 50% less callose deposition and an uneven distribution pattern of the pathogen. In conclusion, our work shows that SYTA is required for maintaining the unique shape of the SE endomembrane system, and for diverse SE functions including callose deposition, carbon translocation and response to pathogens.
Menuet, K.; Lupatelli, C. A.; Fazari, A.; Fricaux, T.; Sousa, G. d.; de Almeida Engler, J.; Coustau, C.
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The establishment of aphid-plant interaction involves the secretion of a salivary MIF protein. Morphological analyses revealed that aphid MpMIF1 prevents plant cell death, protects organelles from stress, and may promote plant cellular recovery. Co-expression of aphid MpMIF1 and the cell death inducer Npp1 revealed that MpMIF1 modulates autophagy-related genes ATG7/BECLIN1, impair plant senescence regulator ATAF1 and regulate apoptosis-like via Caspase-3-like activity. This effect on multiple-cell death pathways helps to maintain cellular homeostasis during aphid infection. Investigations on DNA Damage Response (DDR) signaling pathways demonstrated that aphid MpMIF1 reduces {gamma}H2A.X phosphorylation, maintains activity of the DNA repair protein RAD51 and stabilizes cell cycle checkpoint expression WEE1 under genotoxic stress. Therefore, MpMIF1 actively participates to the maintenance of a functional DDR. Finally, we showed that aphid MpMIF1 physically interacts with SOG1, a functional analog of animal p53 and central regulator of DDR, cell cycle arrest and programmed cell death in plants. These findings establish MpMIF1 as a key regulator of plant cell death during aphid-plant interactions and highlight its potential as a biotechnological tool for protecting major crops against aphid infection.
Nagalla, A. D. D.; Morita, R.; Ichida, H.; Hayashi, Y.; Shirakawa, Y.; Ichinose, K.; Sato, T.; Toriyama, K.; Abe, T.
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Photoperiod sensitivity (PS) is a key biological response in plants as they adapt to specific environments. Rice (Oryza sativa L.) exhibits a clear PS, as it implements critical phase transition decisions based on PS signals. In this study, we identified a novel PS gene, JMJ706, that is expected to deliver photoperiod-related signals to the flowering-time regulatory network in a day-length-dependent manner. The JMJ706 mutants exhibit early flowering under LD and later flowering under SD compared to WT plants. The gene encodes an H3K9me2 demethylase, and under long-day (LD) conditions, its demethylase activity facilitates the expression of Grain number, Plant height, and Heading-date7 (Ghd7). Since Ghd7 is a floral repressor in LD, it promotes the vegetative phase by delaying flowering. Under short-day conditions (SD), H3K9me2 demethylase activity facilitates Early heading-date 1 (Ehd1) expression, and it acts as a floral accelerator by inducing Heading date 3 (Hd3a) and RICE FLOWERING LOCUS T 1 (RFT1). Furthermore, we propose that the daylength-dependent promotion of target genes (Ghd7 and Ehd1) occurs through demethylation of specific promoter regions at a crucial time window. In addition, JMJ706 may play an important role in regulating plant architecture, including plant height. The natural variation in JMJ706 alleles shows high frequencies across major rice subpopulations, suggesting that JMJ706 could play an important role in the geographical distribution and adaptation of rice cultivars. Our results may add a new layer to the rice flowering-time regulatory pathway, supporting regional adaptation and potential for future breeding.
Lingemann, L. T.; Biley, D.; Horz, J. M.; Khatun, N.; Pucker, B.
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While most plant lineages are pigmented by anthocyanins, several families in the Caryophyllales represent a major exception by showing a replacement of anthocyanin pigmentation by betalain pigmentation. The mutual exclusion of anthocyanins and betalains at the family level has been well established for over 50 years and has been mechanistically explained. Chenopodiaceae are a betalain-pigmented lineage lacking a key anthocyanin biosynthesis gene and lacking the key activating transcription factor of the anthocyanin biosynthesis. A publication by Zhang et al., 2024 claims that anthocyanins would be responsible for the red pigmentation in leaves of Chenopodium quinoa. Here, we assessed this study and reanalyzed the RNA-seq datasets generated in this study to demonstrate that there is no evidence for anthocyanin biosynthesis, but activity of the betalain and carotenoid biosynthesis could explain the observed pigmentation of quinoa leaves.
Madhu, A.; Gandhivel, V. H.-S.; Raju, S.; Dey, R.; Shivaprasad, P. V.
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Histone variant H2A.X is a well-conserved histone that plays crucial roles in mediating DNA damage response across eukaryotes. Although H2A.X expresses even without any stress, and decorates gene bodies of actively expressed genes, it is not known if H2A.X has functions beyond DNA damage repair. Using genetic, high throughput genomics and molecular approaches, we identified a previously unappreciated role of H2A.X in regulating development-associated genes. Using custom-made antibodies specific to H2A.X variant, we show that it suppressed the deposition of active H3K4me3 marks over gene bodies and Transposable elements (TE)s, specifically regulating several root development, photosynthesis, and pigmentation-related genes as seen by the impairment of these processes in h2a.x ko (knockout) plants. H2A.X also suppressed global deposition of repressive mark H3K9me2 by restricting activity of H2A variant H2A.W. In agreement with this, there was a genome-wide re-localization of H2A.W to TEs and a few genes in h2a.x ko plants. H2A.X overexpressing plants exhibited stress phenotypes including increased anthocyanin levels, mimicking the transcriptome of DNA damaged wildtype plants. The transcriptome of kd lines of FACT complex, a known chaperone of H2A.X, was largely similar to that of h2a.x ko, suggesting that the development-associated functions of FACT are at least partially due to H2A.X. These results suggest a key role of H2A.X in regulating the competing histone marks and this function might be conserved across plants. Graphical Abstract O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=123 SRC="FIGDIR/small/707635v1_ufig1.gif" ALT="Figure 1"> View larger version (62K): org.highwire.dtl.DTLVardef@1b2fe74org.highwire.dtl.DTLVardef@5fa3c8org.highwire.dtl.DTLVardef@f9b741org.highwire.dtl.DTLVardef@6e1101_HPS_FORMAT_FIGEXP M_FIG C_FIG
Wang, S.; Wang, C.; Mei, Z.; Yang, Y.; Zhong, S.; Qiu, J.; Wang, Z.; Wang, L.; Chen, S.; Fang, W.; Chen, F.; Jiang, J.
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In many flowering plants, the transition from vegetative growth to reproductive development is regulated by seasonal changes in photoperiod. Under inductive photoperiods, leaves produce the florigen FT (FLOWERING LOCUS T), which is transported to the shoot apex to promote flowering. The photoperiod is known to have a major effect on the flowering of chrysanthemum. In the perennial short-day (SD) plant Chrysanthemum seticuspe, the expression of CsFTL3 (FT-like gene) does not increase immediately after shifting from long-day (LD) to SD conditions but gradually accumulates under continuous SD conditions, peaking during inflorescence development. However, the underlying mechanism remains elusive. We show that CsFDL1 (an ortholog of FD) and CsFTL3 exhibit a significant inverse expression pattern in leaves during the initial stage of short-day inductions. Furthermore, the expression of CsFTL3 is upregulated in the leaves of CsFDL1-knockdown transgenic lines. CsFDL1 is expressed in leaves and forms a complex with CsFTL3 to recognize several TCGA- and ACGT-containing motifs in the CsFTL3 promoter. The CsFTL3-CsFDL1 complex downregulates CsFTL3 expression, thereby preventing its excessive induction by SD signals and inhibiting precocious floral transition. This study reveals that CsFDL1 acts as a key early repressor in the photoperiodic flowering pathway of chrysanthemum leaf, mediating negative feedback regulation by forming a complex with CsFTL3 to achieve precise temporal control of short-day-dependent flowering responses.
Fischer, V.; Dassow, C. M.; Pucker, B.
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Plant genome sequences provide access to the gene repertoire of a species. This facilitates basic research, biotechnological processes, or horticultural applications. Here, we present the genome sequence of Begonia manicata and unravel the genes underlying the pigmentation of red structures emerging from its leaves and stems. Structural genes of the anthocyanin biosynthesis and corresponding regulatory genes were discovered to be upregulated in these red structures suggesting that the pigmentation is caused by the accumulation of anthocyanins. Our work provides a resource for future studies on pigmentation of Begoniaceae.
Ueda, T.; Adachi, S.; Sugimoto, K.; Maeda, M. H.; Yamanouchi, U.; Mizobuchi, R.; Taniguchi, Y.; Hirasawa, T.; Yamamoto, T.; Tanaka, J.
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Improving rice (Oryza sativa L.) yield requires a balanced enhancement of both sink size and source capacity. While many QTLs for sink size have been identified, only a few are known for source capacity, which is essential for achieving high yield. Here we identified qHP10 as a major QTL for increased photosynthetic rate by using chromosome segment substitution lines derived from a cross between the high-yielding indica cultivar Takanari and the average-yielding japonica cultivar Koshihikari. High-resolution mapping combined with CRISPR/Cas9-induced mutagenesis revealed that the causative gene underlying qHP10 is Mitogen-Activated Protein Kinase 4 (OsMPK4). A near-isogenic line carrying the OsMPK4Takanari allele (NIL-OsMPK4) had a 15-25% higher photosynthetic rate than Koshihikari. NIL-OsMPK4 also had higher stomatal conductance than Koshihikari but similar stomatal pore size and density, indicating that increased stomatal aperture increases photosynthetic rate. This enhancement is likely attributable to the down-regulation of OsMPK4 expression, which increases stomatal conductance and thus promotes CO2 uptake. Our findings demonstrate that OsMPK4 is a promising genetic target for increasing source capacity and, potentially, rice yield through molecular breeding. (175 words)